EVGENIY DUBROVIN


Current Position
Senior Research Associate, Chair of Physics of Polymers and Crystals, Faculty of Physics, M.V.Lomonosov Moscow State University
Born in Moscow in 1980
Education
1997 - 2003 - M.V.Lomonosov Moscow State University, Faculty of Physics, Chair of Biophysics. Master of science in biophysics, 2003 (diploma with excellence).
2003 - 2005 - M.V.Lomonosov Moscow State University, Faculty of Physics, Chair of Physics of Polymers and Crystals. Candidate of Science (PhD) in Physics and Mathematics
Scope of scientific interests: Scanning probe microscopy of nucleic acids, proteins, nucleoproteins, viruses, bacterial cells. Self-organization of biopolymers on the surface
Foreign languages: English, German
Hobby: Tourism, chess, classical guitar
Email

Awards:

Moscow government grant, 2001
Scholarship of the President of Russian Federation for PhD students, 2004-2005
Moscow grant for PhD students in the field of science and technologies, 2005
LG Chem Scholarship for PhD students, 2006
Academia Europaea Prize for young Russian scientists, 2009
M.V. Lomonosov Moscow State University scholarship, 2010, 2012, 2013

The list of publications

  1. E.V. Dubrovin, M. Schächtele, D.V. Klinov, and T.E. Schäffer. Time-lapsed single biomolecule atomic force microscopy investigation on modified graphite in solution. Langmuir, 2017. DOI
  2. E.V. Dubrovin, M. Schächtele, and T.E. Schäffer. Nanotemplate-directed DNA segmental thermal motion. RSC Advances, 2016, 6, 79584-79592. DOI
  3. N.A. Barinov, V.V. Prokhorov, E.V. Dubrovin, D.V. Klinov. AFM visualization at a single-molecule level of denaturated states of proteins on graphite. Colloids and Surfaces B: Biointerfaces, 2016, 146, 777-784. DOI
  4. O.N. Koroleva, E.V. Dubrovin, I.V. Yaminsky, V.L. Drutsa. Effect of DNA bending on transcriptional interference in the systems of closely spaced convergent promoters. Biochimica et Biophysica Acta - General Subjects, 2016, 1860, 2086–2096. DOI
  5. O.N. Koroleva, E.V. Dubrovin, A.P. Tolstova, N.V. Kuzmina, T.V. Laptinskaya, I.V. Yaminsky, V.L. Drutsa. A hypothetical hierarchical mechanism of self-assembly of Escherichia coli RNA polymerase σ70 subunit. Soft Matter, 2016, 12, 1974-1982. DOI
  6. P.V. Gorelkin, A.S. Erofeev, G.A. Kiselev, D.V. Kolesov, E.V. Dubrovin, I.V. Yaminsky. Synthetic sialylglycopolymer receptor for virus detection using cantilever-based sensors. The Analyst, 2015, 140, 6131-6137. DOI
  7. A.P. Tolstova, E.V. Dubrovin, O.N. Koroleva. Investigation of σ70 subunit structure dependence in Escherichia coli RNA polymerase on ionic strength by the molecular dynamics simulation method. Biophysics, 2015, 60, 865–869. DOI
  8. E.V. Dubrovin, G.V. Presnova, M.Yu Rubtsova, A.M. Egorov, V.G. Grigorenko, I.V. Yaminsky. The Use of Atomic Force Microscopy for 3D Analysis of Nucleic Acid Hybridization on Microarrays. Acta naturae, 2015, 7, 108–114. PDF
  9. E.V. Dubrovin, S. Speller, I.V. Yaminsky. Statistical analysis of molecular nanotemplate driven DNA adsorption on graphite. Langmuir, 2014, 30, 15423–15432. DOI
  10. E.V. Dubrovin, G.V. Presnova, M.Y. Rubtsova, V.G. Grigorenko, A.I. Ivanin, A.M. Egorov, I.V. Yaminsky. Implementation of scanning probe microscopy for the solution of molecular diagnostics tasks. Biomeditsinskaia khimiia, 2014, 60, 543-547 (in Russian).
  11. O.N. Koroleva, E.V. Dubrovin, Yu.A. Khodak, N.V. Kuzmina, I.V. Yaminsky, V.L. Drutsa. The Model of Amyloid Aggregation of Escherichia coli RNA Polymerase σ70 Subunit Based on AFM Data and In Vitro Assays. Cell Biochemistry and Biophysics, 2013, 66, 623-636. DOI
  12. E.V. Dubrovin, A.V. Popova, S.V. Kraevskiy, S.G. Ignatov, T.E. Ignatyuk, I.V. Yaminsky, N.V. Volozhantsev. Atomic Force Microscopy Analysis of the Acinetobacter baumannii Bacteriophage AP22 Lytic Cycle. PLOS ONE, 2012, 7(10): e47348. DOI
  13. E.V. Dubrovin, O.N. Koroleva, Yu.A. Khodak, N.V. Kuzmina, I.V. Yaminsky, V.L. Drutsa. AFM study of Escherichia coli RNA polymerase σ70 subunit aggregation. Nanomedicine: Nanotechnology, Biology and Medicine, 2012, 8, 54-62. DOI
  14. E.V. Dubrovin, G.N. Fedyukina, S.V. Kraevsky, T.E. Ignatyuk, I.V. Yaminsky and S.G. Ignatov. AFM Specific Identification of Bacterial Cell Fragments on Biofunctional Surfaces. The Open Microbiology Journal, 2012, 6, 22-28. DOI
  15. M.V. Arkhipenko, E.K. Petrova, N.A. Nikitin, A.D. Protopopova, E.V. Dubrovin, I.V. Yaminskii, N.P. Rodionova, O. V. Karpova, J. G. Atabekov. Characteristics of Artificial Virus-like Particles Assembled in vitro from Potato Virus X Coat Protein and Foreign Viral RNAs. Acta Naturae, 2011 3, 40-46. Full text (pdf)
  16. I.V. Yaminskii, P.V. Gorelkin, E.V. Dubrovin. Nanoanalytics for medicine. Biophysics, 2011, 56, 905-909. DOI
  17. Yu.M. Efremov, D.V. Bagrov, E.V. Dubrovin, K.V. Shaitan, I.V. Yaminsky. Atomic Force Microscopy of Animal Cells: Advances and Prospects. Biophysics, 2011, 56, 257-267. DOI
  18. E.V. Dubrovin, J.W. Gerritsen, J.Zivkovic, I.V. Yaminsky, S.Speller. The effect of underlying octadecylamine monolayer on the DNA conformation on the graphite surface. Colloids and Surfaces B: Biointerfaces, 2010, 76, 63-69. DOI
  19. E.V. Dubrovin, T.N. Murugova, K.A. Motovilov, L.S. Yaguzhinsky, I.V. Yaminsky. Application of atomic force microscopy technology to a structural analysis of the mitochondrial inner membrane. Nanotechnologies in Russia, 2009, 4, 876-880. DOI
  20. E.V. Dubrovin, A.G. Voloshin, S.V. Kraevsky, T.E. Ignatyuk, S.S. Abramchuk, I.V. Yaminsky, and S.G. Ignatov. Atomic force microscopy investigation of phage infection of bacteria. Langmuir, 2008, 24, 13068-13074. DOI
  21. E.V. Dubrovin, S.N. Staritsyn, S.A. Yakovenko, I.V. Yaminsky. Self-assembly effect during the adsorption of polynucleotides on stearic acid Langmuir-Blodgett monolayer. Biomacromolecules, 2007, 8, 2258-2261. DOI
  22. E.V. Dubrovin, Yu.F. Drygin, V.K. Novikov, I.V. Yaminsky. Atomic force microscopy as a tool of inspection of viral infection. Nanomedicine: Nanotechnology, Biology and Medicine, 3(2007), 128-131. DOI
  23. E.V. Dubrovin, V.E. Maschenko, V.M. Puzikov, A.V. Semenov, I.V. Yaminsky. Cooperative growth of tetrahedral nanocarbon films. Doklady Physical Chemistry. 403, № 5, 2005, 150-153. DOI
  24. S.N. Staritsyn, S.A. Yakovenko, A.M. Lomonosov, E.V. Dubrovin, I.V. Yaminsky. Intermolecular recognition on polymerized nucleolipids contained Langmuir monolayers. Bulletin of Moscow University. Physics. Astronomy, № 4, 2005, 49-53. Full text in russian (pdf)
  25. E.V. Dubrovin, I.A. Kirik, M.M. Babykin, I.V. Yaminsky. Atomic force microscopy study of pili in the cyanobacterium Synechocystis sp. PCC 6803. In “From Cells to Proteins: Imaging Nature across Dimensions” ed. by Evangelista, V.; Barsanti, L.; Passarelli, V.; Gualtieri, P. Springer, NATO Security Through Science Series, Sub-Series B: Physics and Biophysics, 3, 2005, 405-414. DOI
  26. E.V. Dubrovin, M.N. Kirikova, V.K. Novikov, Yu.F. Drygin, and I. V. Yaminsky. Study of the Peculiarities of Adhesion of Tobacco Mosaic Virus by Atomic Force Microscopy. Colloid Journal, 66 (2004) №6, pp.673-678. DOI
  27. M.A. Skabkin, O.I. Kiselyova, K.G. Chernov, A.V. Sorokin, E.V. Dubrovin, I.V. Yaminsky, V.D. Vasiliev and L.P. Ovchinnikov. Structural organization of mRNA complexes with major core mRNP protein YB-1. Nucleic Acids Research, 32 (2004), pp. 5621–5635. Full text(pdf)
  28. S.N. Staritsyn, V.V. Mamashin, V.V. Zakharychev, I.V. Yaminsky, E.V. Dubrovin, A.M. Lomonosov, V.A. Tverdislov, and S.A. Yakovenko. Mixed Monolayers of Amphiphil-modified Nucleic Bases and Diynoic Acids. I. Phase States at Air-Water Interface and in Langmuir-Blodgett Films. Biophysics, 49 (2004) №4, pp. 586-595. Abstract
  29. D.V. Klinov, E.V. Dubrovin, and I.V. Yaminsky. Scanning Probe Microscopy of DNA on Mica and Graphite. AIP Conference Proceedings, 696 (2003), pp. 452-456. DOI
  30. D.V.Klinov, E.V.Dubrovin, I.V.Yaminsky. Substrate for Scanning Probe Microscopy of DNA: HOPG versus mica. Physics of Low-Dimensional Structures, 3-4 (2003), pp. 119-124.
  31. A.V.Bolshakova, E.V.Dubrovin, A.S.Filonov, M.O.Gallyamov, D.Yu.Gavrilko, O.I.Kiselyova, A.M.Lomonosov, E.B.Meshkov, I.V.Yaminsky. Open Experimental Internet Practical Studies in Nanoscopy of Polymers and Biomacromolecules. Physics of Low-Dimensional Structures, 3-4 (2003), pp. 113-118.
  32. E.V. Dubrovin, V.E.Mashenko, V.M. Puzikov, A.V. Semenov, R.K. Chuzhko, I.V. Yaminsky. Recombination Emission from Tetrahedral Nanocarbon Films. Doklady Physical Chemistry. 388 (2003) Nos. 4-6, February, pp.25-28. DOI
  33. M.O.Gallyamov, E.V.Dubrovin, and I.V.Yaminsky. Micromechanics of Nucleic Acids. Physics of Low-Dimensional Structures, 5-6 (2002), pp. 7-11.

Patents

  1. Method for Escherichia coli bacteria identification by detecting their fragments by atomic force microscopy: Patent 2437937 Russian Federation: IPC C12Q 1/00 G01N 13/00 B01D 15/38 / E.V. Dubrovin, G.N. Fedyukina, S.V. Kraevsky, T.E. Ignatyuk, O.N. Perovskaya, I.V. Yaminsky, S.G. Ignatov; application 2010116544/10, 27.04.2010; date of publication: 27.12.2011 Bull. 36.
  2. Device for identification of nucleotide sequences: Patent 2537267 Russian Federation: IPC C12Q 1/68 / A.S. Erofeev, I.V. Yaminsky, E.V. Dubrovin, A.A. Gaskarov, A.I. Ivanin, M.Y. Rubtsova, G.V. Presnova, M.M. Ulyashova, V.G. Grigirenko, A.M. Egorov; application 2013130178/10; 03.07.2013; date of publication: 20.05.2014, Bull. 14.
en/евгений_дубpoвин.txt · Last modified: 2017/08/31 23:41 by Евгений Дубровин
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